Baselight

Drosophila Melanogaster Genome

Explore the annotated genome of the common fruit fly

@kaggle.mylesoneill_drosophila_melanogaster_genome

Genes Augustus
@kaggle.mylesoneill_drosophila_melanogaster_genome.genes_augustus

  • 1.38 MB
  • 13509 rows
  • 16 columns
bin

Bin

name

Name

chrom

Chrom

strand

Strand

txstart

TxStart

txend

TxEnd

cdsstart

CdsStart

cdsend

CdsEnd

exoncount

ExonCount

exonstarts

ExonStarts

exonends

ExonEnds

score

Score

name2

Name2

cdsstartstat

CdsStartStat

cdsendstat

CdsEndStat

exonframes

ExonFrames

585g1.t1chr2L+6485105746590927666485,7573,7979,8192,8667,10454,6808,7910,8116,8589,9741,10574,g1cmplcmpl0,2,0,2,0,-1,
585g1.t2chr2L+6485105746590927656485,7573,8192,8667,10454,6808,8116,8589,9741,10574,g1cmplcmpl0,2,2,0,-1,
585g2.t1chr2L-107064087511770407842610706,12285,13519,13682,14932,22268,22527,22742,22993,23488,23928,26765,27052,28014,28460,28732,28981,30393,31783,33844,34557,34719,35745,38534,39300,40756,12221,12928,13625,14874,15275,22446,22687,22935,23089,23873,24210,26964,27490,28211,28639,28926,29068,31723,33270,34288,34604,34912,38298,38731,39857,40875,g2cmplcmpl2,1,0,2,1,0,2,1,1,0,0,2,2,0,1,2,2,1,2,2,0,2,2,0,1,0,
585g3.t1chr2L+56305718796762470895656305,61885,67568,67891,68084,70606,56356,61966,67762,68023,70549,71879,g3cmplcmpl-1,-1,0,0,0,2,
585g3.t2chr2L+563057620267624760981156305,66675,67568,67891,68084,70606,72597,74479,74902,75077,75426,56356,67003,67762,68023,70549,70806,72977,74572,75018,75366,76202,g3cmplcmpl-1,-1,0,0,0,2,1,0,0,2,0,
585g4.t1chr2L-81824874158326787062281824,87019,84277,87415,g4cmplcmpl1,0,
585g5.t1chr2L+90635104028906881039361590635,94988,95131,95353,97883,98787,99658,99784,100571,100761,101015,101248,102583,103005,103877,90813,95070,95301,97833,98470,99346,99723,100516,100703,100942,101194,101619,102906,103434,104028,g5cmplcmpl0,2,0,2,1,0,1,0,0,0,1,0,2,1,1,
585g5.t2chr2L+94785104145948511039361594785,94988,95131,95353,97883,98787,99658,99784,100571,100761,101015,101248,102583,103005,103877,94892,95070,95301,97833,98470,99346,99723,100516,100703,100909,101194,101619,102906,103434,104145,g5cmplcmpl0,2,0,2,1,0,1,0,0,0,1,0,2,1,1,
585g6.t1chr2L-1040581067551044721066425104058,105004,105390,105511,106038,104947,105336,105455,105823,106755,g6cmplcmpl2,0,1,1,0,
585g7.t1chr2L+1078751143041086851135427107875,108147,110405,110754,111004,112689,113433,108101,108809,110483,110877,111117,113369,114304,g7cmplcmpl-1,0,1,1,1,0,2,

CREATE TABLE genes_augustus (
  "bin" BIGINT,
  "name" VARCHAR,
  "chrom" VARCHAR,
  "strand" VARCHAR,
  "txstart" BIGINT,
  "txend" BIGINT,
  "cdsstart" BIGINT,
  "cdsend" BIGINT,
  "exoncount" BIGINT,
  "exonstarts" VARCHAR,
  "exonends" VARCHAR,
  "score" BIGINT,
  "name2" VARCHAR,
  "cdsstartstat" VARCHAR,
  "cdsendstat" VARCHAR,
  "exonframes" VARCHAR
);

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