About this Dataset

Data From: Microbial Volatile Organic Compounds Mediate Attraction By A Primary But Not Secondary Stored Product Insect Pest In Wheat

This dataset is associated with the forthcoming publication entitled, "Microbial volatile organic compounds mediate attraction by a primary but not secondary stored product insect pest in wheat", and includes data on grain damage from near infrared spectroscopy, behavioral data from wind tunnel and release-recapture experiments, as well as volatile characterization of headspace from moldy grain. For all files, incubation intervals 9, 18, and 27 d represent how long grain was incubated after being tempered to a grain moisture of 12, 15, or 19% or left untempered (ctrl; 10.8% grain moisture). TSO = Trece storgard oil; empty = negative control (no stimulus), LGB = lesser grain borer (Rhzyopertha dominica), and RFB = red flour beetle (Tribolium castaneum).

Note: The resource 'GC/MS Grain MVOC Headspace Data' was added 2021-08-04 with the deletion of some compounds as unlikely natural compounds and potential contaminants. This is the dataset that undergirds the non-metric multidimensional scaling analysis.

See the included file list for more information about methods and results of each file in this dataset.

Resources in this dataset:

Resource Title: GC-MS/Headspace Data.

File Name: tvw_final_gc_ms_data.csv

Resource Software Recommended: Microsoft Excel,url: https://www.microsoft.com/en-us/microsoft-365/excel

Resource Title: Microbial damage on wheat evaluated with near-infrared spectroscopy.

File Name: tvw_nearinfrared_sorting_damaged_grain_fungal_exp.csv

Resource Software Recommended: Microsoft Excel,url: https://www.microsoft.com/en-us/microsoft-365/excel

Resource Title: Release-Recapture Datasets with LGB & RFB.

File Name: tvw_rr_lgb_rfb_microbial_cues.csv

Resource Software Recommended: Microsoft Excel,url: https://www.microsoft.com/en-us/microsoft-365/excel

Resource Title: Wind tunnel response by RGB & LGB.

File Name: tvw_wt_lgb_rfb_data_microbial_cues.csv

Resource Software Recommended: Microsoft Excel,url: https://www.microsoft.com/en-us/microsoft-365/excel

Resource Title: GC/MS Grain MVOC Headspace Data.

File Name: taylor_headspace_final_data_peer_reviewed_ag_commons.csv

Resource Software Recommended: Microsoft Excel,url: https://www.microsoft.com/en-us/microsoft-365/excel

Resource Title: README file list.

File Name: file_list_MVOCwheat.txt
Organization: Department of Agriculture
Last updated: 2024-03-30T11:20:39.834750
Tags: agriculture, ars, behavior, chemical-ecology, data-gov, entomology, headspace, lesser-grain-borer, microbial-cues, mvocs, np304, red-flour-beetle, stored-product-pests, stored-products, trapping, wind-tunnel

Tables

Taylor Headspace Final Data Peer Reviewed Ag Commons

@usgov.usda_gov_data_from_microbial_volatile_organic_compound_f435f0f7.taylor_headspace_final_data_peer_reviewed_ag_commons

29.16 kB
58 rows
32 columns

CREATE TABLE taylor_headspace_final_data_peer_reviewed_ag_commons (
  "rep" VARCHAR,
  "incubation" BIGINT,
  "moisture" BIGINT,
  "incubationmoisture" BIGINT,
  "n_1_butanol_3_methyl" DOUBLE  -- 1-Butanol, 3-methyl-,
  "n_1_butanol_2_methyl" DOUBLE  -- 1-Butanol, 2-methyl-,
  "n_2_3_butanediol_r" DOUBLE  -- 2,3-Butanediol, (R?-),
  "n_2_3_butanediol_s" DOUBLE  -- 2,3-Butanediol, (S?-),
  "n_2_octene_z" DOUBLE  -- 2-Octene, (Z)-,
  "heptane_2_4_dimethyl" DOUBLE  -- Heptane, 2,4-dimethyl-,
  "n_2_nonenal_e" DOUBLE  -- 2-Nonenal, (E)-,
  "butanoic_acid_2_methyl_ethyl_ester" DOUBLE  -- Butanoic Acid, 2-methyl-, Ethyl Ester,
  "octane_4_methyl" DOUBLE  -- Octane, 4-methyl-,
  "n_1_hexanol" DOUBLE  -- 1-Hexanol,
  "butyrolactone" DOUBLE,
  "n_2_3h_furanone_dihydro_5_methyl" DOUBLE  -- 2(3H)-Furanone, Dihydro-5-methyl-,
  "nonane_4_methyl" DOUBLE  -- Nonane, 4-methyl-,
  "n_1_octen_3_ol" DOUBLE  -- 1-Octen-3-ol,
  "n_1_hexanol_2_ethyl" DOUBLE  -- 1-Hexanol, 2-ethyl-,
  "nonane_5_methyl_5_propyl" DOUBLE  -- Nonane, 5-methyl-5-propyl-,
  "phenol_2_methoxy" DOUBLE  -- Phenol, 2-methoxy-,
  "cyclopentane_1_2_dipropyl" DOUBLE  -- Cyclopentane, 1,2-dipropyl-,
  "nonanal" DOUBLE,
  "n_2_phenylethanol" DOUBLE  -- 2-Phenylethanol,
  "cinnamaldehyde_e" DOUBLE  -- Cinnamaldehyde, (E)-,
  "n_1_ethanone_3_4_dimethylphenyl" DOUBLE  -- 1-ethanone,(3,4-dimethylphenyl-),
  "cis_jasmone" DOUBLE,
  "benzenemethanol_4_methoxy" DOUBLE  -- Benzenemethanol, 4-methoxy-,
  "n_5_9_undecadien_2_one_6_10_dimethyl" DOUBLE  -- 5,9-undecadien-2-one, (6,10-dimethyl-),
  "pentanoic_acid_1_1_dimethylpropyl_ester" DOUBLE  -- Pentanoic Acid, 1,1-dimethylpropyl Ester,
  "sulfurous_acid_pentadecyl_2_propyl_ester" DOUBLE  -- Sulfurous Acid, Pentadecyl 2-propyl Ester,
  "sulfurous_acid_hexyl_octyl_ester" DOUBLE  -- Sulfurous Acid, Hexyl Octyl Ester
);

Tvw Nearinfrared Sorting Damaged Grain Fungal Exp

@usgov.usda_gov_data_from_microbial_volatile_organic_compound_f435f0f7.tvw_nearinfrared_sorting_damaged_grain_fungal_exp

7.48 kB
24 rows
8 columns

CREATE TABLE tvw_nearinfrared_sorting_damaged_grain_fungal_exp (
  "date" TIMESTAMP,
  "replicate" BIGINT,
  "grain_moisture" VARCHAR,
  "incubation_interval" BIGINT,
  "total_weight" DOUBLE,
  "weight_good_grain" DOUBLE,
  "weight_damaged_grain" DOUBLE,
  "n__weight_damaged_grain" DOUBLE  -- % Weight Damaged Grain
);

Tvw Rr Lgb Rfb Microbial Cues

@usgov.usda_gov_data_from_microbial_volatile_organic_compound_f435f0f7.tvw_rr_lgb_rfb_microbial_cues

6.79 kB
290 rows
7 columns

CREATE TABLE tvw_rr_lgb_rfb_microbial_cues (
  "release_recapture_behavioral_experiments_2018_2019" VARCHAR,
  "unnamed_1" VARCHAR  -- Unnamed: 1,
  "unnamed_2" VARCHAR  -- Unnamed: 2,
  "unnamed_3" VARCHAR  -- Unnamed: 3,
  "unnamed_4" VARCHAR  -- Unnamed: 4,
  "unnamed_5" VARCHAR  -- Unnamed: 5,
  "unnamed_6" VARCHAR  -- Unnamed: 6
);

Tvw Wt Lgb Rfb Data Microbial Cues

@usgov.usda_gov_data_from_microbial_volatile_organic_compound_f435f0f7.tvw_wt_lgb_rfb_data_microbial_cues

13.56 kB
1,472 rows
10 columns

CREATE TABLE tvw_wt_lgb_rfb_data_microbial_cues (
  "wind_tunnel_behavioral_experiments_2018_2019" VARCHAR,
  "unnamed_1" VARCHAR  -- Unnamed: 1,
  "unnamed_2" VARCHAR  -- Unnamed: 2,
  "unnamed_3" VARCHAR  -- Unnamed: 3,
  "unnamed_4" VARCHAR  -- Unnamed: 4,
  "unnamed_5" VARCHAR  -- Unnamed: 5,
  "each_trial_2_min_long" VARCHAR,
  "unnamed_7" VARCHAR  -- Unnamed: 7,
  "unnamed_8" VARCHAR  -- Unnamed: 8,
  "unnamed_9" VARCHAR  -- Unnamed: 9
);