About this Dataset

Data From: Genome-wide Association And Genomic Prediction Identifies Soybean Cyst Nematode Resistance In Common Bean Including A Syntenic Region To Soybean Rhg1 Locus

A panel of single nucleotide polymorphisms (SNPs) for 363 common bean accessions was generated. A genome-wide association study (GWAS) was applied to detect SNPs significantly associated with resistance to Heterodera glycines (HG) also known as the soybean cyst nematode (SCN) in the core collection of common bean, Phaseolus vulgaris. There were 84,416 SNPs identified in 363 common bean accessions.

Resources in this dataset:

Resource Title: SNP Location on Chromosomes.

File Name: SNP locations chr and position.csv

Resource Title: Bean lines and genotypes.

File Name: Bean lines and genotype.csv
Organization: Department of Agriculture
Last updated: 2024-03-30T11:17:19.150480
Tags: ars, data-gov, np303

Tables

Bean Lines And Genotype

@usgov.usda_gov_data_from_genome_wide_association_and_genomic_3c32ebff.bean_lines_and_genotype

577.88 kB
84,416 rows
2 columns

CREATE TABLE bean_lines_and_genotype (
  "chrom" BIGINT,
  "pos" BIGINT
);